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  • 33404-78-3 Structure
  • Basic information

    1. Product Name: negamycin
    2. Synonyms: negamycin;(3R,5R)-3,6-Diamino-5-hydroxyhexanoic acid 2-(carboxymethyl)-2-methyl hydrazide;(3R,5R)-3,6-Diamino-5-hydroxyhexanoic acid-N'-methyl-N'-(2-oxo-2-hydroxyethyl) hydrazide
    3. CAS NO:33404-78-3
    4. Molecular Formula: C9H20N4O4
    5. Molecular Weight: 248.28
    6. EINECS: N/A
    7. Product Categories: N/A
    8. Mol File: 33404-78-3.mol
    9. Article Data: 18
  • Chemical Properties

    1. Melting Point: 110-120° (dec)
    2. Boiling Point: N/A
    3. Flash Point: N/A
    4. Appearance: /
    5. Density: 1.303g/cm3
    6. Refractive Index: 1.555
    7. Storage Temp.: N/A
    8. Solubility: N/A
    9. PKA: pKa values after treatment with HCl-methanol: 3.55, 8.10, 9.75(
    10. CAS DataBase Reference: negamycin(CAS DataBase Reference)
    11. NIST Chemistry Reference: negamycin(33404-78-3)
    12. EPA Substance Registry System: negamycin(33404-78-3)
  • Safety Data

    1. Hazard Codes: N/A
    2. Statements: N/A
    3. Safety Statements: N/A
    4. WGK Germany:
    5. RTECS:
    6. HazardClass: N/A
    7. PackingGroup: N/A
    8. Hazardous Substances Data: 33404-78-3(Hazardous Substances Data)

33404-78-3 Usage

Description

Negamycin, an aminoglycoside antibiotic, is produced by the bacterium Streptomyces platensis. It possesses potent antibacterial properties against a broad spectrum of pathogens. By binding to the bacterial 30S ribosomal subunit, negamycin disrupts protein synthesis, leading to cell death. This mechanism of action makes it effective against bacteria resistant to other antibiotics, and it has shown promise for the treatment of multidrug-resistant infections. Ongoing research aims to explore its potential clinical applications and develop new derivatives with improved properties.

Uses

Used in Pharmaceutical Industry:
Negamycin is used as an antibiotic for the treatment of bacterial infections. Its potent antibacterial properties and effectiveness against multidrug-resistant bacteria make it a valuable asset in combating resistant infections.
Used in Research and Development:
Negamycin is used as a subject of research for exploring its potential clinical applications and developing new derivatives with improved properties. This research aims to enhance its therapeutic efficacy and expand its use in treating various bacterial infections.

Check Digit Verification of cas no

The CAS Registry Mumber 33404-78-3 includes 8 digits separated into 3 groups by hyphens. The first part of the number,starting from the left, has 5 digits, 3,3,4,0 and 4 respectively; the second part has 2 digits, 7 and 8 respectively.
Calculate Digit Verification of CAS Registry Number 33404-78:
(7*3)+(6*3)+(5*4)+(4*0)+(3*4)+(2*7)+(1*8)=93
93 % 10 = 3
So 33404-78-3 is a valid CAS Registry Number.
InChI:InChI=1/C9H20N4O4/c1-13(5-9(16)17)12-8(15)3-6(11)2-7(14)4-10/h6-7,14H,2-5,10-11H2,1H3,(H,12,15)(H,16,17)

33404-78-3SDS

SAFETY DATA SHEETS

According to Globally Harmonized System of Classification and Labelling of Chemicals (GHS) - Sixth revised edition

Version: 1.0

Creation Date: Aug 17, 2017

Revision Date: Aug 17, 2017

1.Identification

1.1 GHS Product identifier

Product name 2-[[(3,6-diamino-5-hydroxyhexanoyl)amino]-methylamino]acetic acid

1.2 Other means of identification

Product number -
Other names Negamycin

1.3 Recommended use of the chemical and restrictions on use

Identified uses For industry use only.
Uses advised against no data available

1.4 Supplier's details

1.5 Emergency phone number

Emergency phone number -
Service hours Monday to Friday, 9am-5pm (Standard time zone: UTC/GMT +8 hours).

More Details:33404-78-3 SDS

33404-78-3Synthetic route

(R)-tert-butyl (R)-5-[2-(tert-butoxycarbonylamino)-3-{(tert-butoxycarbonylmethyl)methylaminocarbamoyl}propyl]-2,2-dimethyloxazolidine-3-carboxylate
1037825-22-1

(R)-tert-butyl (R)-5-[2-(tert-butoxycarbonylamino)-3-{(tert-butoxycarbonylmethyl)methylaminocarbamoyl}propyl]-2,2-dimethyloxazolidine-3-carboxylate

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogenchloride In 1,4-dioxane at 0℃; for 2h;98%
[N'-((3R,5R)-3-Amino-6-benzyloxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid benzyl ester

[N'-((3R,5R)-3-Amino-6-benzyloxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; acetic acid; palladium on activated charcoal In methanol under 2250.2 Torr; for 12h; Ambient temperature;96%
2-((3R,5R)-2-benzyloxycarbonyl-5-(chloromethyl)isoxazolidinyl)acetic acid
1613376-41-2

2-((3R,5R)-2-benzyloxycarbonyl-5-(chloromethyl)isoxazolidinyl)acetic acid

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With palladium 10% on activated carbon; hydrogen; acetic acid In methanol; water at 20℃; under 2068.65 Torr; for 24h;94%
{N'-[(3R,5R)-6-Azido-5-hydroxy-3-((4S,5R)-2-oxo-4,5-diphenyl-oxazolidin-3-yl)-hexanoyl]-N-methyl-hydrazino}-acetic acid benzyl ester

{N'-[(3R,5R)-6-Azido-5-hydroxy-3-((4S,5R)-2-oxo-4,5-diphenyl-oxazolidin-3-yl)-hexanoyl]-N-methyl-hydrazino}-acetic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; acetic acid; palladium on activated charcoal In methanol under 2068.6 Torr; for 8h; Ambient temperature;91%
[N'-((3R,5R)-3,6-Diazido-5-benzyloxymethoxy-hexanoyl)-N-methyl-hydrazino]-acetic acid benzyl ester
119138-84-0

[N'-((3R,5R)-3,6-Diazido-5-benzyloxymethoxy-hexanoyl)-N-methyl-hydrazino]-acetic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; palladium on activated charcoal In methanol; acetic acid89%
[N'-(6-amino-3-tert-butoxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid tert-butyl ester
540721-28-6

[N'-(6-amino-3-tert-butoxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogenchloride In 1,4-dioxane at 20℃; for 9h;78%
benzyl (3R,5R)-<2-<methyl>isoxazolidin-3-yl>acetyl>-1-methylhydrazino>acetate
103321-73-9

benzyl (3R,5R)-<2-isoxazolidin-3-yl>acetyl>-1-methylhydrazino>acetate

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; palladium on activated charcoal In methanol; acetic acid under 2280 Torr; for 12h;75%
With methanol; hydrogen; acetic acid; palladium on activated charcoal under 2280 Torr; for 12h;75%
(2S,3R,6R)-6-[(R)-2-(Benzyl-benzyloxycarbonyl-amino)-3-(N'-benzyloxycarbonylmethyl-N'-methyl-hydrazinocarbonyl)-propyl]-2,3-diphenyl-morpholine-4-carboxylic acid benzyl ester
461385-14-8

(2S,3R,6R)-6-[(R)-2-(Benzyl-benzyloxycarbonyl-amino)-3-(N'-benzyloxycarbonylmethyl-N'-methyl-hydrazinocarbonyl)-propyl]-2,3-diphenyl-morpholine-4-carboxylic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; acetic acid; palladium on activated charcoal In methanol; water at 75℃; under 2068.65 Torr; for 4.25h;75%
{N'-[(3R,5R)-3,6-Diazido-5-(tert-butyl-dimethyl-silanyloxy)-hexanoyl]-N-methyl-hydrazino}-acetic acid benzyl ester
119688-96-9

{N'-[(3R,5R)-3,6-Diazido-5-(tert-butyl-dimethyl-silanyloxy)-hexanoyl]-N-methyl-hydrazino}-acetic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; acetic acid; palladium on activated charcoal In methanol at 20℃;72%
With hydrogen; palladium on activated charcoal In 1,4-dioxane; hydrogenchloride
tert-butyl 2-(2-((3R,5R)-6-azido-5-((tert-butyldimethylsilyl)oxy)-3-(1,1-dimethylethylsulfinamido)hexanoyl)-1-methylhydrazinyl)acetate

tert-butyl 2-(2-((3R,5R)-6-azido-5-((tert-butyldimethylsilyl)oxy)-3-(1,1-dimethylethylsulfinamido)hexanoyl)-1-methylhydrazinyl)acetate

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Stage #1: tert-butyl 2-(2-((3R,5R)-6-azido-5-((tert-butyldimethylsilyl)oxy)-3-(1,1-dimethylethylsulfinamido)hexanoyl)-1-methylhydrazinyl)acetate With palladium 10% on activated carbon; hydrogen In methanol at 20℃; for 4h;
Stage #2: With hydrogenchloride In methanol; water at 20℃; for 2h;
68%
benzyl 2-(1-methylhydrazinyl)acetate
55501-33-2

benzyl 2-(1-methylhydrazinyl)acetate

(3R,5R)-6-Azido-3-benzyloxycarbonylamino-5-(tetrahydro-pyran-2-yloxy)-hexanoic acid
81601-97-0

(3R,5R)-6-Azido-3-benzyloxycarbonylamino-5-(tetrahydro-pyran-2-yloxy)-hexanoic acid

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Yield given. Multistep reaction;
2-phenyl-1,3-dioxan-4-carbaldehyde
102794-92-3

2-phenyl-1,3-dioxan-4-carbaldehyde

2-(trimethylsilyl)ethyl α-(dimethoxyphosphoryl)-N-(tert-butyloxycarbonyl)glycinate
142602-45-7

2-(trimethylsilyl)ethyl α-(dimethoxyphosphoryl)-N-(tert-butyloxycarbonyl)glycinate

A

negamycin
33404-78-3

negamycin

B

(Z)-2-tert-Butoxycarbonylamino-3-(2-phenyl-[1,3]dioxan-4-yl)-acrylic acid 2-trimethylsilanyl-ethyl ester
142602-50-4, 145958-03-8

(Z)-2-tert-Butoxycarbonylamino-3-(2-phenyl-[1,3]dioxan-4-yl)-acrylic acid 2-trimethylsilanyl-ethyl ester

Conditions
ConditionsYield
With 1,8-diazabicyclo[5.4.0]undec-7-ene In dichloromethane for 2h; Ambient temperature; Yield given. Yields of byproduct given. Title compound not separated from byproducts;
(N'-{(3R,5R)-6-Amino-3-[benzyl-((R)-1-phenyl-ethyl)-amino]-5-hydroxy-hexanoyl}-N-methyl-hydrazino)-acetic acid benzyl ester

(N'-{(3R,5R)-6-Amino-3-[benzyl-((R)-1-phenyl-ethyl)-amino]-5-hydroxy-hexanoyl}-N-methyl-hydrazino)-acetic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
With hydrogen; palladium dihydroxide under 4560 Torr; Ambient temperature; Yield given;
With 20 % Pd(OH)2/C; hydrogen; acetic acid In methanol at 20℃; under 3800.26 Torr; for 22h;331 mg
C12H24N6O3Si
942292-44-6

C12H24N6O3Si

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1.1: ethyl chloroformate; Et3N / toluene / -5 °C
1.2: 65 percent / toluene
2.1: 72 percent / H2; aq. AcOH / Pd/C / methanol / 20 °C
View Scheme
(-)-tert-butoxycarbonyl-(R)-3-amino-5-hexenoic acid

(-)-tert-butoxycarbonyl-(R)-3-amino-5-hexenoic acid

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 10 steps
1: 88 percent / I2; KI; aq. NaHCO3 / CH2Cl2 / 2.5 h / 20 °C
2: NaN3 / dimethylformamide / 4 h / 55 °C
3: 89 percent / aq. LiOH / methanol / 2 h / 20 °C
4: imidazole / CH2Cl2 / 18 h / 20 °C
5: 80 percent / aq. K2CO3 / methanol / 2 h / 20 °C
6: pyridine / CH2Cl2 / 24 h / 20 °C
7: 96 percent / dimethylformamide / 3 h / 20 °C
8: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
9: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
10: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
(2-azidomethyl-6-oxo-tetrahydro-pyran-4-yl)-carbamic acid tert-butyl ester
540721-22-0

(2-azidomethyl-6-oxo-tetrahydro-pyran-4-yl)-carbamic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 8 steps
1: 89 percent / aq. LiOH / methanol / 2 h / 20 °C
2: imidazole / CH2Cl2 / 18 h / 20 °C
3: 80 percent / aq. K2CO3 / methanol / 2 h / 20 °C
4: pyridine / CH2Cl2 / 24 h / 20 °C
5: 96 percent / dimethylformamide / 3 h / 20 °C
6: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
7: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
8: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
(2-iodomethyl-6-oxo-tetrahydro-pyran-4-yl)-carbamic acid tert-butyl ester
551964-17-1

(2-iodomethyl-6-oxo-tetrahydro-pyran-4-yl)-carbamic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 9 steps
1: NaN3 / dimethylformamide / 4 h / 55 °C
2: 89 percent / aq. LiOH / methanol / 2 h / 20 °C
3: imidazole / CH2Cl2 / 18 h / 20 °C
4: 80 percent / aq. K2CO3 / methanol / 2 h / 20 °C
5: pyridine / CH2Cl2 / 24 h / 20 °C
6: 96 percent / dimethylformamide / 3 h / 20 °C
7: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
8: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
9: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
6-azido-3-tert-butoxycarbonylamino-5-hydroxy-hexanoic acid
551964-18-2

6-azido-3-tert-butoxycarbonylamino-5-hydroxy-hexanoic acid

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 7 steps
1: imidazole / CH2Cl2 / 18 h / 20 °C
2: 80 percent / aq. K2CO3 / methanol / 2 h / 20 °C
3: pyridine / CH2Cl2 / 24 h / 20 °C
4: 96 percent / dimethylformamide / 3 h / 20 °C
5: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
6: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
7: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoic acid
540721-23-1

6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoic acid

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 5 steps
1: pyridine / CH2Cl2 / 24 h / 20 °C
2: 96 percent / dimethylformamide / 3 h / 20 °C
3: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
4: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
5: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
[N'-(6-azido-3-tert-butoxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid tert-butyl ester
540721-27-5

[N'-(6-azido-3-tert-butoxycarbonylamino-5-hydroxy-hexanoyl)-N-methyl-hydrazino]-acetic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
2: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
C23H48N4O5Si2

C23H48N4O5Si2

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 6 steps
1: 80 percent / aq. K2CO3 / methanol / 2 h / 20 °C
2: pyridine / CH2Cl2 / 24 h / 20 °C
3: 96 percent / dimethylformamide / 3 h / 20 °C
4: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
5: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
6: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
{N'-[6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoyl]-N-methyl-hydrazino}-acetic acid tert-butyl ester
540721-26-4

{N'-[6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoyl]-N-methyl-hydrazino}-acetic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
2: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
3: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoic acid pentafluorophenyl ester
540721-25-3

6-azido-3-tert-butoxycarbonylamino-5-(tert-butyl-dimethyl-silanyloxy)-hexanoic acid pentafluorophenyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 4 steps
1: 96 percent / dimethylformamide / 3 h / 20 °C
2: 70 percent / TBAF / tetrahydrofuran / 1.25 h / 20 °C
3: 90 percent / H2 / Pd/C / ethyl acetate / 3 h / 20 °C
4: 78 percent / aq. HCl / dioxane / 9 h / 20 °C
View Scheme
2R,5R,6S-2-(2'-(benzylamino)pent-4'-enyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

2R,5R,6S-2-(2'-(benzylamino)pent-4'-enyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 5 steps
1.1: 80 percent / NaOH / dioxane; H2O / 12 h / 0 - 5 °C
2.1: O3 / methanol; CH2Cl2 / -78 °C
2.2: 73 percent / (C6H5)3P / methanol; CH2Cl2 / 20 °C
3.1: 97 percent / pyridinium dichromate / dimethylformamide / 12 h / 20 °C
4.1: 80 percent / 1-hydroxybenzotriazole; (C2H5)3N; 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide / CH2Cl2 / 12 h / 20 °C
5.1: 75 percent / CH3COOH; H2 / Pd/C / methanol; H2O / 4.25 h / 75 °C / 2068.65 Torr
View Scheme
2R,2'R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)-4'-oxobutyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester
461385-12-6

2R,2'R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)-4'-oxobutyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: 97 percent / pyridinium dichromate / dimethylformamide / 12 h / 20 °C
2: 80 percent / 1-hydroxybenzotriazole; (C2H5)3N; 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide / CH2Cl2 / 12 h / 20 °C
3: 75 percent / CH3COOH; H2 / Pd/C / methanol; H2O / 4.25 h / 75 °C / 2068.65 Torr
View Scheme
2R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)pent-4'-enyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

2R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)pent-4'-enyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 4 steps
1.1: O3 / methanol; CH2Cl2 / -78 °C
1.2: 73 percent / (C6H5)3P / methanol; CH2Cl2 / 20 °C
2.1: 97 percent / pyridinium dichromate / dimethylformamide / 12 h / 20 °C
3.1: 80 percent / 1-hydroxybenzotriazole; (C2H5)3N; 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide / CH2Cl2 / 12 h / 20 °C
4.1: 75 percent / CH3COOH; H2 / Pd/C / methanol; H2O / 4.25 h / 75 °C / 2068.65 Torr
View Scheme
2R,2'R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)-3'-carboxypropyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester
461385-13-7

2R,2'R,5R,6S-2-(2'-((benzyl)(benzyloxycarbonyl)amino)-3'-carboxypropyl)-5,6-diphenylmorpholine-4-carboxylic acid benzyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 2 steps
1: 80 percent / 1-hydroxybenzotriazole; (C2H5)3N; 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide / CH2Cl2 / 12 h / 20 °C
2: 75 percent / CH3COOH; H2 / Pd/C / methanol; H2O / 4.25 h / 75 °C / 2068.65 Torr
View Scheme
(R)-5-{(R)-2-[Benzyl-((R)-1-phenyl-ethyl)-amino]-3-carboxy-propyl}-2,2-dimethyl-oxazolidine-3-carboxylic acid tert-butyl ester
181772-92-9

(R)-5-{(R)-2-[Benzyl-((R)-1-phenyl-ethyl)-amino]-3-carboxy-propyl}-2,2-dimethyl-oxazolidine-3-carboxylic acid tert-butyl ester

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 3 steps
1: 96 percent / DCC, Et3N, HOBt / Ambient temperature
2: aq. TFA / tetrahydrofuran
3: H2 / Pd(OH)2/C / 4560 Torr / Ambient temperature
View Scheme
Multi-step reaction with 4 steps
1.1: triethylamine / dichloromethane / 0.17 h / -15 °C / Inert atmosphere
2.1: triethylamine / dichloromethane / 0.58 h / -15 - 0 °C / Inert atmosphere
3.1: trifluoroacetic acid / 0.5 h / 0 - 20 °C
3.2: 16 h / 20 °C
3.3: pH 9
4.1: 20 % Pd(OH)2/C; hydrogen; acetic acid / methanol / 22 h / 20 °C / 3800.26 Torr
View Scheme
Multi-step reaction with 3 steps
1.1: benzotriazol-1-ol; triethylamine; dicyclohexyl-carbodiimide / dichloromethane / 5.25 h / 0 - 20 °C / Inert atmosphere
2.1: trifluoroacetic acid / 0.5 h / 0 - 20 °C
2.2: 16 h / 20 °C
2.3: pH 9
3.1: 20 % Pd(OH)2/C; hydrogen; acetic acid / methanol / 22 h / 20 °C / 3800.26 Torr
View Scheme
3''-pentyl (R,R,R)-3-[N-benzyl-N-(α-methylbenzyl)amino]-4-[2',2';-dimethyl-N(3')-tert-butoxycarbonyl-1',3'-oxazolidin-5'-yl]butanoate
181772-74-7

3''-pentyl (R,R,R)-3-[N-benzyl-N-(α-methylbenzyl)amino]-4-[2',2';-dimethyl-N(3')-tert-butoxycarbonyl-1',3'-oxazolidin-5'-yl]butanoate

negamycin
33404-78-3

negamycin

Conditions
ConditionsYield
Multi-step reaction with 4 steps
1: 82 percent / aq. LiOH / methanol; tetrahydrofuran
2: 96 percent / DCC, Et3N, HOBt / Ambient temperature
3: aq. TFA / tetrahydrofuran
4: H2 / Pd(OH)2/C / 4560 Torr / Ambient temperature
View Scheme
Multi-step reaction with 5 steps
1.1: lithium hydroxide monohydrate; water / tetrahydrofuran; methanol / 24 h / Reflux
1.2: 20 °C
2.1: triethylamine / dichloromethane / 0.17 h / -15 °C / Inert atmosphere
3.1: triethylamine / dichloromethane / 0.58 h / -15 - 0 °C / Inert atmosphere
4.1: trifluoroacetic acid / 0.5 h / 0 - 20 °C
4.2: 16 h / 20 °C
4.3: pH 9
5.1: 20 % Pd(OH)2/C; hydrogen; acetic acid / methanol / 22 h / 20 °C / 3800.26 Torr
View Scheme
Multi-step reaction with 4 steps
1.1: lithium hydroxide monohydrate; water / tetrahydrofuran; methanol / 24 h / Reflux
1.2: 20 °C
2.1: benzotriazol-1-ol; triethylamine; dicyclohexyl-carbodiimide / dichloromethane / 5.25 h / 0 - 20 °C / Inert atmosphere
3.1: trifluoroacetic acid / 0.5 h / 0 - 20 °C
3.2: 16 h / 20 °C
3.3: pH 9
4.1: 20 % Pd(OH)2/C; hydrogen; acetic acid / methanol / 22 h / 20 °C / 3800.26 Torr
View Scheme
negamycin
33404-78-3

negamycin

δ-Hydroxy-β-lysin

δ-Hydroxy-β-lysin

Conditions
ConditionsYield
With hydrogenchloride Heating;
negamycin
33404-78-3

negamycin

2-benzyloxycarbonylsulfanyl-4,6-dimethyl-pyrimidine
42116-21-2

2-benzyloxycarbonylsulfanyl-4,6-dimethyl-pyrimidine

Di-N-Z-negamycin

Di-N-Z-negamycin

Conditions
ConditionsYield
With triethylamine In 1,4-dioxane; water

33404-78-3Upstream product

33404-78-3Relevant articles and documents

Shibahara et al.

, p. 4353 (1972)

A total synthesis of (+)-negamycin through isoxazolidine allylation

Bates, Roderick W.,Khanizeman, Rab'Iah Nisha,Hirao, Hajime,Tay, Yu Shan,Sae-Lao, Patcharaporn

, p. 4879 - 4884 (2014/07/07)

The β-amino acid antibiotic (+)-negamycin has been synthesised in ten steps from epichlorohydrin via Sakurai allylation of an isoxazolidine intermediate. The key allylation reaction proceeded with complete trans-selectivity, which is attributed to electrostatic attraction between the chlorine atom and the iminium ion in the Sakurai intermediate. This journal is the Partner Organisations 2014.

Efficient total synthesis of (+)-negamycin, a potential chemotherapeutic agent for genetic diseases

Hayashi, Yoshio,Regnier, Thomas,Nishiguchi, Shigenobu,Sydnes, Magne O.,Hashimoto, Daisuke,Hasegawa, Junya,Katoh, Takahiro,Kajimoto, Tetsuya,Shiozuka, Masataka,Matsuda, Ryoichi,Node, Manabu,Kiso, Yoshiaki

supporting information; experimental part, p. 2379 - 2381 (2009/02/03)

Herein, we describe an efficient strategy for the total synthesis of (+)-negamycin using commercially available achiral N-Boc-2-aminoacetaldehyde as starting material with 42% overall yield for a limited number of steps. The Royal Society of Chemistry.

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